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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_886 from
Pseudomonas fluorescens FW300-N2E2
Transcriptional regulator, LacI family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_1996
DNA repair protein RadC
no
0.27
2
Pf6N2E2
_2611
UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-)
no
0.26
3
Pf6N2E2
_4167
Zinc ABC transporter, ATP-binding protein ZnuC
no
0.25
4
Pf6N2E2
_1734
PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein
no
0.24
5
Pf6N2E2
_2432
Probable transmembrane protein
no
0.23
6
Pf6N2E2
_4036
Glutaryl-CoA dehydrogenase (EC 1.3.99.7)
no
0.23
7
Pf6N2E2
_2352
Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ)
no
0.23
8
Pf6N2E2
_5522
FIG001943: hypothetical protein YajQ
no
0.22
9
Pf6N2E2
_5114
type 4 fimbrial biogenesis protein FimU
no
0.22
10
Pf6N2E2
_2822
Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family
no
0.21
11
Pf6N2E2
_155
Probable transmembrane protein
no
0.21
12
Pf6N2E2
_594
FMN reductase, NADPH-dependent
no
0.21
13
Pf6N2E2
_641
Extracytoplasmic function (ECF) sigma factor VreI
no
0.21
14
Pf6N2E2
_5613
FIG00953674: hypothetical protein
no
0.21
15
Pf6N2E2
_5473
hydrolase, alpha/beta fold family
no
0.21
16
Pf6N2E2
_2090
Protein involved in meta-pathway of phenol degradation
no
0.20
17
Pf6N2E2
_5647
Transcriptional regulator, TetR family
no
0.20
18
Pf6N2E2
_3478
Adenosine deaminase (EC 3.5.4.4)
no
0.20
19
Pf6N2E2
_2821
hypothetical protein
no
0.20
20
Pf6N2E2
_2549
hypothetical protein
no
0.20
Or look for
negative cofitness