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  • Top cofit genes for Pf6N2E2_83 from Pseudomonas fluorescens FW300-N2E2

    transcriptional regulator, AraC family
    SEED: transcriptional regulator, AraC family
    KEGG: AraC family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_2788 Transcriptional regulator, AsnC family no 0.27
    2 Pf6N2E2_1557 hypothetical protein no 0.26
    3 Pf6N2E2_6006 L-rhamnose operon transcriptional activator RhaR no 0.26
    4 Pf6N2E2_2688 YD repeat protein no 0.25
    5 Pf6N2E2_428 Protease subunit of ATP-dependent Clp proteases no 0.25
    6 Pf6N2E2_2675 ATP-dependent RNA helicase SrmB no 0.25
    7 Pf6N2E2_780 FIG00955564: hypothetical protein no 0.25
    8 Pf6N2E2_5793 Aspartyl aminopeptidase no 0.24
    9 Pf6N2E2_2423 Molybdenum cofactor biosynthesis protein MoaB no 0.24
    10 Pf6N2E2_4985 Nucleoside-diphosphate-sugar epimerases 0.52 0.24
    11 Pf6N2E2_794 YD repeat protein no 0.24
    12 Pf6N2E2_2950 Conserved secreted protein no 0.24
    13 Pf6N2E2_4394 Putrescine utilization regulator 0.57 0.24
    14 Pf6N2E2_5170 FIG00955330: hypothetical protein 0.21 0.24
    15 Pf6N2E2_5667 Arginine N-succinyltransferase (EC 2.3.1.109) no 0.24
    16 Pf6N2E2_4124 Uncharacterized protein with LysM domain, COG1652 no 0.24
    17 Pf6N2E2_2378 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) no 0.23
    18 Pf6N2E2_2123 hypothetical protein no 0.23
    19 Pf6N2E2_1534 Probable transmembrane protein 0.46 0.23
    20 Pf6N2E2_5666 Arginine N-succinyltransferase, alpha subunit (EC 2.3.1.109) no 0.23

    Or look for negative cofitness