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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_819 from
Pseudomonas fluorescens FW300-N2E2
Response regulator
SEED: Response regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_1448
hypothetical protein
no
0.35
2
Pf6N2E2
_4485
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
0.35
0.33
3
Pf6N2E2
_1902
Oxidoreductase, aldo/keto reductase family
no
0.33
4
Pf6N2E2
_1650
Sucrose alpha-glucosidase (EC 3.2.1.48)
(from data)
no
0.32
5
Pf6N2E2
_1203
Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16)
no
0.31
6
Pf6N2E2
_3942
FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated
0.24
0.30
7
Pf6N2E2
_5724
Nucleoside triphosphate pyrophosphohydrolase MazG (EC 3.6.1.8)
0.11
0.30
8
Pf6N2E2
_2673
Cytochrome c family protein
no
0.29
9
Pf6N2E2
_4078
Aldose 1-epimerase
0.32
0.29
10
Pf6N2E2
_2777
Urea carboxylase-related ABC transporter, ATPase protein
no
0.28
11
Pf6N2E2
_6078
Xaa-Pro aminopeptidase (EC 3.4.11.9)
0.31
0.28
12
Pf6N2E2
_4641
cytosolic long-chain acyl-CoA thioester hydrolase family protein
0.23
0.28
13
Pf6N2E2
_1404
Nitrous oxide reductase maturation transmembrane protein NosY
no
0.27
14
Pf6N2E2
_3397
Phage protein
no
0.27
15
Pf6N2E2
_3466
FIG000605: protein co-occurring with transport systems (COG1739)
no
0.27
16
Pf6N2E2
_4546
hypothetical protein
no
0.26
17
Pf6N2E2
_2178
FIG00960144: hypothetical protein
no
0.26
18
Pf6N2E2
_3271
Phosphocarrier protein, nitrogen regulation associated
no
0.26
19
Pf6N2E2
_1978
DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster
no
0.26
20
Pf6N2E2
_2278
Transcription-repair coupling factor
no
0.25
Or look for
negative cofitness