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  • Top cofit genes for Pf6N2E2_798 from Pseudomonas fluorescens FW300-N2E2

    Ku domain protein
    SEED: Ku domain protein
    KEGG: DNA end-binding protein Ku

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_4484 Ferric iron ABC transporter, permease protein no 0.26
    2 Pf6N2E2_905 FIG00962753: hypothetical protein no 0.25
    3 Pf6N2E2_1492 No significant database matches no 0.24
    4 Pf6N2E2_4483 Ferric iron ABC transporter, iron-binding protein no 0.24
    5 Pf6N2E2_1642 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor no 0.23
    6 Pf6N2E2_659 Transcriptional regulatory protein ompR 0.26 0.23
    7 Pf6N2E2_3322 Peptide synthetase no 0.23
    8 Pf6N2E2_2949 UPF0225 protein YchJ 0.45 0.22
    9 Pf6N2E2_3380 L-lactate permease no 0.22
    10 Pf6N2E2_3407 putative solute-binding component of ABC transporter no 0.22
    11 Pf6N2E2_3395 hypothetical protein no 0.22
    12 Pf6N2E2_827 probable dioxygenase 0.37 0.22
    13 Pf6N2E2_1827 Choline-sulfatase (EC 3.1.6.6) 0.28 0.22
    14 Pf6N2E2_5733 NLP/P60 family protein no 0.22
    15 Pf6N2E2_3384 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG no 0.22
    16 Pf6N2E2_4414 FIG00953808: hypothetical protein no 0.21
    17 Pf6N2E2_4950 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) no 0.21
    18 Pf6N2E2_3523 hypothetical protein no 0.21
    19 Pf6N2E2_3824 FIG00953806: hypothetical protein 0.20 0.21
    20 Pf6N2E2_1083 hypothetical protein no 0.21

    Or look for negative cofitness