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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_794 from
Pseudomonas fluorescens FW300-N2E2
YD repeat protein
SEED: YD repeat protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_1258
FIG00960119: hypothetical protein
no
0.31
2
Pf6N2E2
_601
GlpG protein (membrane protein of glp regulon)
no
0.31
3
Pf6N2E2
_1673
Transcriptional regulator, TetR family
no
0.30
4
Pf6N2E2
_2688
YD repeat protein
no
0.30
5
Pf6N2E2
_854
Xylose isomerase domain protein TIM barrel
no
0.29
6
Pf6N2E2
_1915
Dienelactone hydrolase and related enzymes
no
0.29
7
Pf6N2E2
_5901
hypothetical protein
no
0.29
8
Pf6N2E2
_4824
Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)
no
0.29
9
Pf6N2E2
_237
hypothetical protein
no
0.28
10
Pf6N2E2
_3420
Proline iminopeptidase (EC 3.4.11.5)
no
0.28
11
Pf6N2E2
_570
DNA-3-methyladenine glycosylase II (EC 3.2.2.21)
no
0.28
12
Pf6N2E2
_780
FIG00955564: hypothetical protein
no
0.28
13
Pf6N2E2
_5809
hypothetical protein
no
0.28
14
Pf6N2E2
_2532
Thioredoxin
no
0.28
15
Pf6N2E2
_5310
Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-)
no
0.28
16
Pf6N2E2
_1618
ABC-type amino acid transport, signal transduction systems, periplasmic component/domain
no
0.27
17
Pf6N2E2
_4817
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1)
no
0.27
18
Pf6N2E2
_3103
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
no
0.27
19
Pf6N2E2
_3861
Abortive infection bacteriophage resistance protein
no
0.27
20
Pf6N2E2
_2750
Putative permease PerM (= YfgO)
0.62
0.27
Or look for
negative cofitness