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Protein
Homologs
Top cofit genes for Pf6N2E2_662 from
Pseudomonas fluorescens FW300-N2E2
Valyl-tRNA synthetase
SEED: Valyl-tRNA synthetase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_1426
FIG00966546: hypothetical protein
no
0.25
2
Pf6N2E2
_1089
Delta 1-piperideine-2-carboxylate reductase (EC 1.5.1.21) / Delta 1-pyrroline-2-carboxylate reductase (EC 1.5.1.1)
no
0.24
3
Pf6N2E2
_2532
Thioredoxin
no
0.23
4
Pf6N2E2
_832
Outer membrane component of tripartite multidrug resistance system
no
0.23
5
Pf6N2E2
_5925
Transglutaminase-like enzymes, putative cysteine proteases
no
0.22
6
Pf6N2E2
_500
Beta-ureidopropionase (EC 3.5.1.6)
0.11
0.21
7
Pf6N2E2
_1819
1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7)
no
0.20
8
Pf6N2E2
_5031
hypothetical protein
no
0.20
9
Pf6N2E2
_4133
Choline-sulfatase (EC 3.1.6.6)
no
0.20
10
Pf6N2E2
_1092
Probable vanillate O-demethylase oxygenase subunit oxidoreductase protein (EC 1.14.13.-)
no
0.20
11
Pf6N2E2
_3299
5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
no
0.20
12
Pf6N2E2
_5898
Integral membrane protein
no
0.19
13
Pf6N2E2
_1445
Glutathione S-transferase
no
0.19
14
Pf6N2E2
_4294
lipoprotein
no
0.19
15
Pf6N2E2
_844
Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)
no
0.19
16
Pf6N2E2
_187
Urea ABC transporter, ATPase protein UrtE
no
0.19
17
Pf6N2E2
_5408
Transcriptional regulator, GntR family
no
0.19
18
Pf6N2E2
_497
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism
no
0.18
19
Pf6N2E2
_1640
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.18
20
Pf6N2E2
_70
tRNA pseudouridine synthase A (EC 4.2.1.70)
no
0.18
Or look for
negative cofitness