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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_620 from
Pseudomonas fluorescens FW300-N2E2
BatD
SEED: BatD
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_624
hypothetical protein PA3071
0.99
0.90
2
Pf6N2E2
_621
TPR domain protein in aerotolerance operon
0.99
0.90
3
Pf6N2E2
_625
MoxR-like ATPase in aerotolerance operon
0.99
0.85
4
Pf6N2E2
_622
BatA (Bacteroides aerotolerance operon)
0.99
0.83
5
Pf6N2E2
_5430
Transglycosylase, Slt family
0.98
0.77
6
Pf6N2E2
_4169
Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
0.87
0.64
7
Pf6N2E2
_623
FIG00954674: hypothetical protein
0.96
0.62
8
Pf6N2E2
_586
Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)
0.69
0.40
9
Pf6N2E2
_3753
DamX, an inner membrane protein involved in bile resistance
0.59
0.38
10
Pf6N2E2
_3062
Membrane-associated zinc metalloprotease
0.74
0.38
11
Pf6N2E2
_3515
Probable transmembrane protein
no
0.37
12
Pf6N2E2
_3504
Biosynthetic arginine decarboxylase (EC 4.1.1.19)
0.51
0.36
13
Pf6N2E2
_4352
ATP-dependent DNA helicase RecG (EC 3.6.1.-)
0.39
0.35
14
Pf6N2E2
_5340
Stringent starvation protein A
0.31
0.35
15
Pf6N2E2
_4155
N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
0.80
0.34
16
Pf6N2E2
_4147
Fused spore maturation proteins A and B
0.45
0.34
17
Pf6N2E2
_5633
Aromatic amino acid transport protein AroP
0.38
0.33
18
Pf6N2E2
_5383
Poly(beta-D-mannuronate) C5 epimerase precursor (EC 5.1.3.-)
no
0.33
19
Pf6N2E2
_463
Transcriptional regulatory protein RstA
0.45
0.33
20
Pf6N2E2
_4416
Tyrosine recombinase XerC
no
0.32
Or look for
negative cofitness