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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_614 from
Pseudomonas fluorescens FW300-N2E2
3-carboxymuconate cyclase
SEED: 3-carboxymuconate cyclase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_2863
Gluconate permease
0.40
0.56
2
Pf6N2E2
_5442
Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2)
0.41
0.53
3
Pf6N2E2
_2864
Gluconokinase (EC 2.7.1.12)
0.39
0.49
4
Pf6N2E2
_2893
hypothetical protein
no
0.42
5
Pf6N2E2
_2897
Glucokinase (EC 2.7.1.2)
0.52
0.41
6
Pf6N2E2
_2895
Integral membrane sensor signal transduction histidine kinase (EC 2.7.13.3), glucose catabolism cluster
0.30
0.41
7
Pf6N2E2
_658
sensor histidine kinase
0.47
0.40
8
Pf6N2E2
_2892
Glucose ABC transport system, periplasmic sugar-binding protein
0.57
0.40
9
Pf6N2E2
_2889
Glucose ABC transporter, ATP-binding subunit (EC 3.6.3.-)
0.59
0.40
10
Pf6N2E2
_2891
Glucose ABC transport system, inner membrane component 1
0.41
0.39
11
Pf6N2E2
_2885
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
0.45
0.39
12
Pf6N2E2
_2890
Glucose ABC transport system, inner membrane component 2
0.39
0.38
13
Pf6N2E2
_2896
DNA-binding response regulator GltR, controls specific porins for the entry of glucose
0.36
0.37
14
Pf6N2E2
_613
lipoprotein, putative
0.52
0.32
15
Pf6N2E2
_5731
Putative permease often clustered with de novo purine synthesis
0.56
0.31
16
Pf6N2E2
_4276
Phosphogluconate repressor HexR, RpiR family
0.19
0.29
17
Pf6N2E2
_5150
Glucose-6-phosphate isomerase (EC 5.3.1.9)
0.24
0.29
18
Pf6N2E2
_5275
putative membrane protein
no
0.29
19
Pf6N2E2
_4777
5-aminopentanamidase (EC 3.5.1.30)
(from data)
no
0.29
20
Pf6N2E2
_5661
L-Arginine ABC transporter, permease protein AotQ
(from data)
no
0.28
Or look for
negative cofitness