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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_6064 from
Pseudomonas fluorescens FW300-N2E2
2-methylaconitate isomerase
KEGG: hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_6063
2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79)
0.98
0.82
2
Pf6N2E2
_6061
Methylisocitrate lyase (EC 4.1.3.30)
(from data)
0.92
0.66
3
Pf6N2E2
_6062
2-methylcitrate synthase (EC 2.3.3.5)
(from data)
0.89
0.59
4
Pf6N2E2
_480
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4)
(from data)
0.90
0.51
5
Pf6N2E2
_481
branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4)
(from data)
0.90
0.48
6
Pf6N2E2
_479
Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168)
(from data)
0.89
0.48
7
Pf6N2E2
_6060
Propionate catabolism operon transcriptional regulator of GntR family [predicted]
0.71
0.41
8
Pf6N2E2
_482
Transcriptional regulator BkdR of isoleucine and valine catabolism operon
0.83
0.39
9
Pf6N2E2
_1147
Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17)
0.96
0.39
10
Pf6N2E2
_3270
Hypothetical ATP-binding protein UPF0042, contains P-loop
0.68
0.37
11
Pf6N2E2
_1146
2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5)
(from data)
0.57
0.36
12
Pf6N2E2
_3586
NAD synthetase (EC 6.3.1.5)
0.28
0.36
13
Pf6N2E2
_1143
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases
0.49
0.34
14
Pf6N2E2
_5279
Hypothetical flavoprotein YqcA (clustered with tRNA pseudouridine synthase C)
0.37
0.34
15
Pf6N2E2
_2189
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
0.78
0.33
16
Pf6N2E2
_478
Dihydrolipoyl dehydrogenase (EC 1.8.1.4)
(from data)
0.77
0.32
17
Pf6N2E2
_4084
Transcriptional regulator
0.66
0.32
18
Pf6N2E2
_3580
Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)
0.31
0.31
19
Pf6N2E2
_3791
Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)
no
0.31
20
Pf6N2E2
_4035
L-carnitine dehydratase/bile acid-inducible protein F
0.39
0.31
Or look for
negative cofitness