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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_6041 from
Pseudomonas fluorescens FW300-N2E2
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_3980
Type I secretion system, outer membrane component LapE
no
0.32
2
Pf6N2E2
_3978
Type I secretion system, membrane fusion protein LapC
no
0.31
3
Pf6N2E2
_3979
Type I secretion system ATPase, LssB family LapB
no
0.30
4
Pf6N2E2
_3981
T1SS secreted agglutinin RTX
no
0.30
5
Pf6N2E2
_2537
membrane protein, putative
no
0.28
6
Pf6N2E2
_5128
COG1496: Uncharacterized conserved protein
no
0.28
7
Pf6N2E2
_603
FIG00953934: hypothetical protein
no
0.28
8
Pf6N2E2
_3952
putative RecF protein
no
0.27
9
Pf6N2E2
_6052
Hydantoin racemase (EC 5.1.99.-)
no
0.27
10
Pf6N2E2
_2052
ABC transporter for D-Glucosamine Hydrochloride, permease component 2
(from data)
no
0.27
11
Pf6N2E2
_5923
FIG00956241: hypothetical protein
no
0.26
12
Pf6N2E2
_1567
FIG00964846: hypothetical protein
no
0.26
13
Pf6N2E2
_2650
Type I secretion system, outer membrane component LapE # AggA
no
0.25
14
Pf6N2E2
_761
Hemolysin-type calcium-binding region
no
0.24
15
Pf6N2E2
_6012
Integrase
no
0.24
16
Pf6N2E2
_2963
FIG003033: Helicase domain protein
no
0.23
17
Pf6N2E2
_5889
Short-chain dehydrogenase/reductase SDR
no
0.23
18
Pf6N2E2
_4269
cytosolic long-chain acyl-CoA thioester hydrolase family protein
no
0.23
19
Pf6N2E2
_1809
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
no
0.23
20
Pf6N2E2
_5087
Transcription elongation factor GreB-related protein
no
0.23
Or look for
negative cofitness