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  • Top cofit genes for Pf6N2E2_5909 from Pseudomonas fluorescens FW300-N2E2

    Predicted ATPase with chaperone activity, associated with Flp pilus assembly
    SEED: Predicted ATPase with chaperone activity, associated with Flp pilus assembly

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_1005 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) no 0.30
    2 Pf6N2E2_1603 hypothetical protein no 0.29
    3 Pf6N2E2_5191 Conserved domain protein no 0.27
    4 Pf6N2E2_2229 Major facilitator family transporter no 0.27
    5 Pf6N2E2_5921 Metal-dependent hydrolase related to alanyl-tRNA synthetase no 0.27
    6 Pf6N2E2_2655 Agmatinase (EC 3.5.3.11) no 0.26
    7 Pf6N2E2_3939 Predicted integral membrane protein 0.50 0.26
    8 Pf6N2E2_4730 hypothetical protein no 0.25
    9 Pf6N2E2_4503 Alkanesulfonates-binding protein no 0.25
    10 Pf6N2E2_4508 Transcriptional regulator, TetR family no 0.25
    11 Pf6N2E2_2110 LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase no 0.25
    12 Pf6N2E2_3386 hypothetical protein no 0.25
    13 Pf6N2E2_6009 hypothetical protein no 0.24
    14 Pf6N2E2_4520 hypothetical protein no 0.24
    15 Pf6N2E2_3933 D-2-hydroxyglutarate dehydrogenase no 0.24
    16 Pf6N2E2_4728 hypothetical protein no 0.24
    17 Pf6N2E2_1769 Nucleoside-diphosphate-sugar epimerases 0.68 0.24
    18 Pf6N2E2_165 Ribokinase (EC 2.7.1.15) no 0.24
    19 Pf6N2E2_419 STAS domain protein no 0.24
    20 Pf6N2E2_1281 ATPase involved in DNA repair no 0.23

    Or look for negative cofitness