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  • Top cofit genes for Pf6N2E2_5905 from Pseudomonas fluorescens FW300-N2E2

    Transcriptional regulator of various polyols utilization, AraC family

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_680 D-amino-acid oxidase (EC 1.4.3.3) no 0.33
    2 Pf6N2E2_916 putative membrane protein no 0.30
    3 Pf6N2E2_919 FIG00954373: hypothetical protein no 0.29
    4 Pf6N2E2_1357 PUTATIVE TRANSMEMBRANE PROTEIN no 0.29
    5 Pf6N2E2_4726 YD repeat protein no 0.28
    6 Pf6N2E2_2969 Peptide chain release factor RF-3 no 0.28
    7 Pf6N2E2_1954 Transcriptional regulator, LysR family no 0.28
    8 Pf6N2E2_1257 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) no 0.28
    9 Pf6N2E2_5884 Sensor histidine kinase no 0.28
    10 Pf6N2E2_4037 Glycine cleavage system transcriptional activator no 0.28
    11 Pf6N2E2_278 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) no 0.27
    12 Pf6N2E2_491 hypothetical protein no 0.27
    13 Pf6N2E2_4181 Organic hydroperoxide resistance protein no 0.27
    14 Pf6N2E2_1051 Probable NADH-dependent flavin oxidoreductase yqiG (EC 1.-.-.-) no 0.27
    15 Pf6N2E2_1250 Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent no 0.26
    16 Pf6N2E2_788 hypothetical protein no 0.26
    17 Pf6N2E2_3294 hypothetical protein no 0.26
    18 Pf6N2E2_3200 Putative membrane protein no 0.26
    19 Pf6N2E2_761 Hemolysin-type calcium-binding region no 0.26
    20 Pf6N2E2_1282 Putative outer membrane TonB-dependent receptor associated with haemagglutinin family outer membrane protein no 0.25

    Or look for negative cofitness