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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_5733 from
Pseudomonas fluorescens FW300-N2E2
NLP/P60 family protein
SEED: NLP/P60 family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_586
Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)
0.85
0.76
2
Pf6N2E2
_2030
ABC transporter, periplasmic substrate-binding protein
0.52
0.57
3
Pf6N2E2
_583
Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
0.65
0.54
4
Pf6N2E2
_582
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
0.61
0.53
5
Pf6N2E2
_4585
Cell division protein FtsX
0.72
0.52
6
Pf6N2E2
_2222
Murein-DD-endopeptidase (EC 3.4.99.-)
0.76
0.52
7
Pf6N2E2
_4584
Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)
0.71
0.51
8
Pf6N2E2
_75
Colicin V production protein
0.50
0.50
9
Pf6N2E2
_584
ABC transporter, periplasmic substrate-binding protein
0.65
0.49
10
Pf6N2E2
_1110
FIG00964414: hypothetical protein
0.60
0.49
11
Pf6N2E2
_5734
NLP/P60 family protein
0.47
0.48
12
Pf6N2E2
_2754
Sigma factor RpoE negative regulatory protein RseB precursor
0.46
0.48
13
Pf6N2E2
_4889
Putative transport protein
0.69
0.48
14
Pf6N2E2
_5245
Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
0.40
0.48
15
Pf6N2E2
_5544
TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain
0.61
0.46
16
Pf6N2E2
_4153
Sensory box histidine kinase
no
0.46
17
Pf6N2E2
_2384
CmpX
0.61
0.45
18
Pf6N2E2
_2344
D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4)
0.41
0.45
19
Pf6N2E2
_3850
FIG074102: hypothetical protein
no
0.44
20
Pf6N2E2
_3617
N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)
0.60
0.44
Or look for
negative cofitness