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  • Top cofit genes for Pf6N2E2_5655 from Pseudomonas fluorescens FW300-N2E2

    Prophage antirepressor

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_5073 Large-conductance mechanosensitive channel no 0.34
    2 Pf6N2E2_4520 hypothetical protein no 0.33
    3 Pf6N2E2_6040 hypothetical protein no 0.32
    4 Pf6N2E2_4458 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain no 0.32
    5 Pf6N2E2_4891 hypothetical protein no 0.31
    6 Pf6N2E2_4508 Transcriptional regulator, TetR family no 0.31
    7 Pf6N2E2_1603 hypothetical protein no 0.30
    8 Pf6N2E2_3559 Putative heat shock protein YegD no 0.30
    9 Pf6N2E2_2548 Oxidoreductase, short chain dehydrogenase/reductase family no 0.30
    10 Pf6N2E2_3424 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) no 0.30
    11 Pf6N2E2_4052 FIG00955481: hypothetical protein no 0.29
    12 Pf6N2E2_1501 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) no 0.29
    13 Pf6N2E2_3990 Chemotactic transducer no 0.29
    14 Pf6N2E2_603 FIG00953934: hypothetical protein no 0.29
    15 Pf6N2E2_4258 FIG00953800: hypothetical protein no 0.28
    16 Pf6N2E2_4473 HlyD family secretion protein no 0.28
    17 Pf6N2E2_650 General secretion pathway protein M no 0.28
    18 Pf6N2E2_164 Ribose operon repressor no 0.28
    19 Pf6N2E2_4291 Deacetylases, including yeast histone deacetylase and acetoin utilization protein no 0.27
    20 Pf6N2E2_1546 Transcriptional regulator, LysR family 0.29 0.27

    Or look for negative cofitness