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  • Top cofit genes for Pf6N2E2_5478 from Pseudomonas fluorescens FW300-N2E2

    ABC spermidine/putrescine transporter, inner membrane subunit
    SEED: ABC spermidine/putrescine transporter, inner membrane subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_2339 Guanine deaminase (EC 3.5.4.3) no 0.21
    2 Pf6N2E2_3677 Sensory box/GGDEF family protein no 0.21
    3 Pf6N2E2_4709 Cholesterol oxidase (EC 1.1.3.6) no 0.21
    4 Pf6N2E2_765 Fap system putative outer membrane protein no 0.21
    5 Pf6N2E2_2749 Thiol peroxidase, Bcp-type (EC 1.11.1.15) 0.23 0.21
    6 Pf6N2E2_1218 HemK family modification methylase PA2179 no 0.20
    7 Pf6N2E2_110 Cellobiose phosphotransferase system YdjC-like protein no 0.20
    8 Pf6N2E2_2802 Alcohol dehydrogenase (EC 1.1.1.1) no 0.19
    9 Pf6N2E2_2852 GGDEF domain/EAL domain protein no 0.19
    10 Pf6N2E2_4399 GGDEF domain/EAL domain protein no 0.19
    11 Pf6N2E2_33 Diaminopimelate epimerase (EC 5.1.1.7) no 0.19
    12 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) no 0.19
    13 Pf6N2E2_5192 FIG00953119: hypothetical protein no 0.18
    14 Pf6N2E2_4716 Membrane protein, putative 0.42 0.18
    15 Pf6N2E2_1415 mannuronan C-5-epimerase, putative no 0.18
    16 Pf6N2E2_2905 CoA transferase, CAIB/BAIF family no 0.18
    17 Pf6N2E2_4939 alpha-2-macroglobulin domain protein no 0.18
    18 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein no 0.18
    19 Pf6N2E2_4478 FIG019278: hypothetical protein 0.24 0.18
    20 Pf6N2E2_4636 periplasmic binding protein, putative no 0.17

    Or look for negative cofitness