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  • Top cofit genes for Pf6N2E2_5469 from Pseudomonas fluorescens FW300-N2E2

    L-lysine permease
    SEED: L-lysine permease

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_234 FIG00454312: hypothetical protein no 0.26
    2 Pf6N2E2_4638 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.39 0.25
    3 Pf6N2E2_490 PhaK-like protein 0.46 0.25
    4 Pf6N2E2_208 Glycosyl transferase, group 2 family protein no 0.24
    5 Pf6N2E2_2768 Tricarboxylate transport protein TctC no 0.24
    6 Pf6N2E2_940 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain no 0.24
    7 Pf6N2E2_3192 tRNA:Cm32/Um32 methyltransferase 0.34 0.24
    8 Pf6N2E2_4754 Protein rarD 0.40 0.23
    9 Pf6N2E2_4687 FIG00953780: hypothetical protein 0.42 0.23
    10 Pf6N2E2_4768 Acyl-CoA dehydrogenase (EC 1.3.8.7) no 0.23
    11 Pf6N2E2_3941 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) no 0.23
    12 Pf6N2E2_3616 DNA mismatch repair protein MutL no 0.22
    13 Pf6N2E2_4802 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) 0.34 0.22
    14 Pf6N2E2_1069 autotransporter no 0.22
    15 Pf6N2E2_5132 NADH dehydrogenase (EC 1.6.99.3) no 0.22
    16 Pf6N2E2_5780 Periplasmic protease no 0.22
    17 Pf6N2E2_894 Beta-lactamase-like no 0.22
    18 Pf6N2E2_4803 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) no 0.22
    19 Pf6N2E2_2574 Flagellar synthesis regulator FleN no 0.21
    20 Pf6N2E2_4602 Twitching motility protein PilT no 0.21

    Or look for negative cofitness