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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_5469 from
Pseudomonas fluorescens FW300-N2E2
L-lysine permease
SEED: L-lysine permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_234
FIG00454312: hypothetical protein
no
0.26
2
Pf6N2E2
_4638
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
0.39
0.25
3
Pf6N2E2
_490
PhaK-like protein
0.46
0.25
4
Pf6N2E2
_208
Glycosyl transferase, group 2 family protein
no
0.24
5
Pf6N2E2
_2768
Tricarboxylate transport protein TctC
no
0.24
6
Pf6N2E2
_940
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
no
0.24
7
Pf6N2E2
_3192
tRNA:Cm32/Um32 methyltransferase
0.34
0.24
8
Pf6N2E2
_4754
Protein rarD
0.40
0.23
9
Pf6N2E2
_4687
FIG00953780: hypothetical protein
0.42
0.23
10
Pf6N2E2
_4768
Acyl-CoA dehydrogenase (EC 1.3.8.7)
no
0.23
11
Pf6N2E2
_3941
Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)
no
0.23
12
Pf6N2E2
_3616
DNA mismatch repair protein MutL
no
0.22
13
Pf6N2E2
_4802
Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1)
0.34
0.22
14
Pf6N2E2
_1069
autotransporter
no
0.22
15
Pf6N2E2
_5132
NADH dehydrogenase (EC 1.6.99.3)
no
0.22
16
Pf6N2E2
_5780
Periplasmic protease
no
0.22
17
Pf6N2E2
_894
Beta-lactamase-like
no
0.22
18
Pf6N2E2
_4803
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41)
no
0.22
19
Pf6N2E2
_2574
Flagellar synthesis regulator FleN
no
0.21
20
Pf6N2E2
_4602
Twitching motility protein PilT
no
0.21
Or look for
negative cofitness