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  • Top cofit genes for Pf6N2E2_5366 from Pseudomonas fluorescens FW300-N2E2

    DNA-binding heavy metal response regulator
    SEED: DNA-binding heavy metal response regulator
    KEGG: two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_2849 Chromosome initiation inhibitor no 0.50
    2 Pf6N2E2_1526 MgtC family no 0.47
    3 Pf6N2E2_4295 hypothetical protein no 0.40
    4 Pf6N2E2_3748 Cytochrome B561 no 0.39
    5 Pf6N2E2_1028 Transcriptional regulator, LysR family 0.37 0.39
    6 Pf6N2E2_5517 Glutathione S-transferase (EC 2.5.1.18) 0.29 0.39
    7 Pf6N2E2_2162 Cytochrome c4 no 0.38
    8 Pf6N2E2_3687 FIG00959437: hypothetical protein no 0.37
    9 Pf6N2E2_1857 hypothetical protein no 0.36
    10 Pf6N2E2_5599 Electron transport complex protein RnfA no 0.35
    11 Pf6N2E2_472 FKBP-type peptidyl-prolyl cis-trans isomerase no 0.35
    12 Pf6N2E2_2785 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) no 0.35
    13 Pf6N2E2_217 Signal transduction histidine kinase no 0.35
    14 Pf6N2E2_3471 transcriptional regulator, MerR family no 0.35
    15 Pf6N2E2_5227 Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-) no 0.35
    16 Pf6N2E2_4650 DNA ligase (EC 6.5.1.2) no 0.34
    17 Pf6N2E2_567 Universal stress protein family 7 no 0.34
    18 Pf6N2E2_3756 Type IV pilus biogenesis protein PilQ no 0.34
    19 Pf6N2E2_4171 hypothetical protein no 0.34
    20 Pf6N2E2_4258 FIG00953800: hypothetical protein no 0.34

    Or look for negative cofitness