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  • Top cofit genes for Pf6N2E2_486 from Pseudomonas fluorescens FW300-N2E2

    TRAP-type C4-dicarboxylate transport system, small permease component

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_817 Protein-glutamate methylesterase (EC 3.1.1.61) no 0.34
    2 Pf6N2E2_2007 Error-prone, lesion bypass DNA polymerase V (UmuC) no 0.32
    3 Pf6N2E2_1656 hypothetical protein no 0.31
    4 Pf6N2E2_3072 [Protein-PII] uridylyltransferase (EC 2.7.7.59) no 0.28
    5 Pf6N2E2_4350 RTX toxins and related Ca2+-binding proteins no 0.28
    6 Pf6N2E2_3641 ADP-ribose pyrophosphatase (EC 3.6.1.13) 0.19 0.28
    7 Pf6N2E2_4954 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) no 0.27
    8 Pf6N2E2_1291 Ferrichrome-iron receptor 0.59 0.27
    9 Pf6N2E2_3227 Predicted D-glucarate or D-galactorate regulator, GntR family no 0.27
    10 Pf6N2E2_4153 Sensory box histidine kinase 0.27 0.27
    11 Pf6N2E2_3587 Azurin no 0.26
    12 Pf6N2E2_3850 FIG074102: hypothetical protein no 0.25
    13 Pf6N2E2_5840 hypothetical protein no 0.25
    14 Pf6N2E2_2533 Rhodanese domain protein UPF0176 no 0.25
    15 Pf6N2E2_4396 Acetyl-CoA hydrolase no 0.25
    16 Pf6N2E2_207 related to dolichyl-phosphate mannose synthase no 0.25
    17 Pf6N2E2_5534 FIG000859: hypothetical protein YebC 0.57 0.24
    18 Pf6N2E2_338 Transcriptional regulator, AraC family no 0.24
    19 Pf6N2E2_4394 Putrescine utilization regulator no 0.24
    20 Pf6N2E2_1786 GNAT family acetyltransferase VC2332 no 0.24

    Or look for negative cofitness