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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_4827 from
Pseudomonas fluorescens FW300-N2E2
Lipoate-protein ligase A
SEED: Lipoate-protein ligase A
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_4138
Uncharacterized transporter, similarity to citrate transporter
no
0.32
2
Pf6N2E2
_2286
FIG00953287: hypothetical protein
no
0.29
3
Pf6N2E2
_3335
Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB
no
0.27
4
Pf6N2E2
_5305
Fe(3+) dicitrate transport protein FecA
(from data)
no
0.27
5
Pf6N2E2
_2384
CmpX
no
0.26
6
Pf6N2E2
_5901
hypothetical protein
no
0.25
7
Pf6N2E2
_887
hypothetical protein
no
0.25
8
Pf6N2E2
_3606
23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)
no
0.24
9
Pf6N2E2
_1893
hypothetical protein
no
0.24
10
Pf6N2E2
_4754
Protein rarD
no
0.24
11
Pf6N2E2
_5416
Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51)
no
0.24
12
Pf6N2E2
_2861
hypothetical protein
no
0.23
13
Pf6N2E2
_4479
FIG001590: Putative conserved exported protein precursor
no
0.23
14
Pf6N2E2
_3008
FIG00954242: hypothetical protein
0.32
0.23
15
Pf6N2E2
_3305
hypothetical protein
no
0.23
16
Pf6N2E2
_4476
5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2)
0.19
0.23
17
Pf6N2E2
_5277
FIG00953110: hypothetical protein
0.59
0.22
18
Pf6N2E2
_449
Lactoylglutathione lyase (EC 4.4.1.5)
no
0.22
19
Pf6N2E2
_6053
Hydantoin permease
no
0.22
20
Pf6N2E2
_2045
Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8)
no
0.22
Or look for
negative cofitness