Top cofit genes for Pf6N2E2_482 from Pseudomonas fluorescens FW300-N2E2

Transcriptional regulator BkdR of isoleucine and valine catabolism operon
SEED: Transcriptional regulator BkdR of isoleucine and valine catabolism operon

Rank Hit Name Description Conserved? Cofitness  
1 Pf6N2E2_480 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) (EC 1.2.4.4) (from data) 0.92 0.71
2 Pf6N2E2_479 Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase (EC 2.3.1.168) (from data) 0.90 0.68
3 Pf6N2E2_481 branched-chain alpha-ketoacid dehydrogenase, E1 component alpha subunit (EC 1.2.4.4) (from data) 0.93 0.63
4 Pf6N2E2_2191 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) 0.70 0.51
5 Pf6N2E2_2192 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) 0.63 0.47
6 Pf6N2E2_478 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) 0.87 0.45
7 Pf6N2E2_2194 3-methylcrotonyl-CoA carboxylase, alpha (biotin-containing) subunit (EC 6.4.1.4) (from data) 0.60 0.44
8 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.72 0.43
9 Pf6N2E2_2193 Methylglutaconyl-CoA hydratase (EC 4.2.1.18) (from data) 0.61 0.42
10 Pf6N2E2_3580 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) 0.45 0.40
11 Pf6N2E2_1147 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) 0.73 0.40
12 Pf6N2E2_6064 2-methylaconitate isomerase 0.83 0.39
13 Pf6N2E2_6062 2-methylcitrate synthase (EC 2.3.3.5) (from data) 0.85 0.39
14 Pf6N2E2_3579 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) 0.54 0.39
15 Pf6N2E2_2696 Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) 0.38 0.37
16 Pf6N2E2_3578 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) 0.45 0.36
17 Pf6N2E2_279 Isocitrate lyase (EC 4.1.3.1) 0.29 0.35
18 Pf6N2E2_3576 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 0.35 0.33
19 Pf6N2E2_3577 ABC transporter for L-leucine/L-isoleucine/D-alanine, ATPase component 1 LivG (from data) 0.43 0.32
20 Pf6N2E2_6063 2-methylcitrate dehydratase FeS dependent (EC 4.2.1.79) 0.83 0.32

Or look for negative cofitness