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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_4729 from
Pseudomonas fluorescens FW300-N2E2
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_3493
3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100)
no
0.25
2
Pf6N2E2
_463
Transcriptional regulatory protein RstA
no
0.25
3
Pf6N2E2
_4754
Protein rarD
no
0.24
4
Pf6N2E2
_3335
Uncharacterized iron-regulated membrane protein; Iron-uptake factor PiuB
no
0.23
5
Pf6N2E2
_3507
FIG014328: hypothetical protein
no
0.23
6
Pf6N2E2
_2358
Type III secretion host injection protein (YopB)
no
0.23
7
Pf6N2E2
_4127
Quinone oxidoreductase (EC 1.6.5.5)
no
0.22
8
Pf6N2E2
_4097
FIG00953365: hypothetical protein
no
0.22
9
Pf6N2E2
_2177
Glutamine synthetase (EC 6.3.1.2), putative
no
0.22
10
Pf6N2E2
_4469
Quinone oxidoreductase (EC 1.6.5.5)
no
0.21
11
Pf6N2E2
_4539
Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components)
no
0.21
12
Pf6N2E2
_4434
Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation
no
0.21
13
Pf6N2E2
_5416
Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51)
no
0.21
14
Pf6N2E2
_158
Endonuclease I precursor (EC 3.1.21.1)
no
0.21
15
Pf6N2E2
_3308
Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2)
no
0.21
16
Pf6N2E2
_4712
miscellaneous; unknown
no
0.21
17
Pf6N2E2
_4225
Nicotinamidase (EC 3.5.1.19)
no
0.20
18
Pf6N2E2
_3970
Phosphoenolpyruvate synthase / Pyruvate phosphate dikinase
no
0.20
19
Pf6N2E2
_641
Extracytoplasmic function (ECF) sigma factor VreI
no
0.20
20
Pf6N2E2
_3745
General secretion pathway protein E
no
0.20
Or look for
negative cofitness