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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_4727 from
Pseudomonas fluorescens FW300-N2E2
Cold shock protein CspD
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_4520
hypothetical protein
no
0.36
2
Pf6N2E2
_5517
Glutathione S-transferase (EC 2.5.1.18)
no
0.34
3
Pf6N2E2
_1875
Protoporphyrinogen oxidase (EC 1.3.3.4)
no
0.34
4
Pf6N2E2
_4177
hypothetical protein
no
0.33
5
Pf6N2E2
_405
hypothetical protein
no
0.33
6
Pf6N2E2
_3852
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)
0.17
0.32
7
Pf6N2E2
_4258
FIG00953800: hypothetical protein
no
0.32
8
Pf6N2E2
_6009
hypothetical protein
no
0.32
9
Pf6N2E2
_4295
hypothetical protein
no
0.31
10
Pf6N2E2
_2139
Paraquat-inducible protein A
no
0.30
11
Pf6N2E2
_453
LysR family transcriptional regulator STM2281
no
0.30
12
Pf6N2E2
_1703
Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1)
no
0.29
13
Pf6N2E2
_3428
hypothetical protein
no
0.29
14
Pf6N2E2
_4458
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
no
0.29
15
Pf6N2E2
_295
Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6)
0.36
0.29
16
Pf6N2E2
_4288
Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
no
0.29
17
Pf6N2E2
_1039
Gluconolactonase
no
0.29
18
Pf6N2E2
_3720
FIG027190: Putative transmembrane protein
no
0.29
19
Pf6N2E2
_1028
Transcriptional regulator, LysR family
no
0.29
20
Pf6N2E2
_5297
RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein
no
0.29
Or look for
negative cofitness