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  • Top cofit genes for Pf6N2E2_467 from Pseudomonas fluorescens FW300-N2E2

    Sensory box/GGDEF family protein
    SEED: Sensory box/GGDEF family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_4282 Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) no 0.35
    2 Pf6N2E2_3144 Thiol:disulfide interchange protein DsbC 0.51 0.32
    3 Pf6N2E2_3677 Sensory box/GGDEF family protein 0.55 0.32
    4 Pf6N2E2_4754 Protein rarD 0.45 0.31
    5 Pf6N2E2_2697 Permease of the drug/metabolite transporter (DMT) superfamily no 0.31
    6 Pf6N2E2_2083 hypothetical protein no 0.30
    7 Pf6N2E2_2067 cis/trans isomerase no 0.30
    8 Pf6N2E2_188 Formamidase (EC 3.5.1.49) no 0.29
    9 Pf6N2E2_3565 Bacterioferritin no 0.28
    10 Pf6N2E2_5277 FIG00953110: hypothetical protein no 0.28
    11 Pf6N2E2_5925 Transglutaminase-like enzymes, putative cysteine proteases no 0.28
    12 Pf6N2E2_4399 GGDEF domain/EAL domain protein no 0.28
    13 Pf6N2E2_956 FIG01210404: hypothetical protein no 0.28
    14 Pf6N2E2_3248 Probable transmembrane protein 0.44 0.27
    15 Pf6N2E2_4579 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) no 0.27
    16 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) 0.19 0.26
    17 Pf6N2E2_5913 Similar to TadZ/CpaE, associated with Flp pilus assembly no 0.26
    18 Pf6N2E2_5521 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.48 0.26
    19 Pf6N2E2_5503 FIG01248689: hypothetical protein no 0.26
    20 Pf6N2E2_1217 Gll2069 protein no 0.26

    Or look for negative cofitness