• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for Pf6N2E2_4663 from Pseudomonas fluorescens FW300-N2E2

    Alginate lyase precursor (EC 4.2.2.3)
    SEED: Alginate lyase precursor (EC 4.2.2.3)

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_399 Iron siderophore sensor protein no 0.28
    2 Pf6N2E2_442 FIG00962345: hypothetical protein no 0.27
    3 Pf6N2E2_1898 Catalase (EC 1.11.1.6) no 0.26
    4 Pf6N2E2_2650 Type I secretion system, outer membrane component LapE # AggA 0.54 0.26
    5 Pf6N2E2_1710 FIG00953587: hypothetical protein no 0.25
    6 Pf6N2E2_4065 Orf21; putative lipoprotein 0.13 0.25
    7 Pf6N2E2_972 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster no 0.25
    8 Pf6N2E2_4297 Uncharacterized protein ImpA no 0.24
    9 Pf6N2E2_1069 autotransporter no 0.24
    10 Pf6N2E2_3788 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) no 0.23
    11 Pf6N2E2_3981 T1SS secreted agglutinin RTX no 0.23
    12 Pf6N2E2_3400 hypothetical protein no 0.23
    13 Pf6N2E2_1241 sensor histidine kinase no 0.23
    14 Pf6N2E2_1453 Xylose activator XylR (AraC family) no 0.23
    15 Pf6N2E2_4985 Nucleoside-diphosphate-sugar epimerases no 0.23
    16 Pf6N2E2_4315 Rhs-family protein no 0.22
    17 Pf6N2E2_3980 Type I secretion system, outer membrane component LapE no 0.22
    18 Pf6N2E2_5342 21 kDa hemolysin precursor no 0.22
    19 Pf6N2E2_4726 YD repeat protein no 0.22
    20 Pf6N2E2_3322 Peptide synthetase no 0.22

    Or look for negative cofitness