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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_4642 from
Pseudomonas fluorescens FW300-N2E2
Putative transport
SEED: Putative transport
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_336
hypothetical protein
0.52
0.30
2
Pf6N2E2
_796
Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO
no
0.28
3
Pf6N2E2
_1689
Probable porin
no
0.28
4
Pf6N2E2
_1211
Lactoylglutathione lyase
0.23
0.25
5
Pf6N2E2
_6081
Transcriptional regulator, TetR family, in cluster with 2-hydroxychromene-2-carboxylate isomerase family protein, glutathione-dependent
no
0.24
6
Pf6N2E2
_4532
Flagellum-specific ATP synthase FliI
no
0.23
7
Pf6N2E2
_2135
Aldose 1-epimerase (EC 5.1.3.3)
0.31
0.22
8
Pf6N2E2
_1733
Oligopeptide transporter, OPT family
no
0.22
9
Pf6N2E2
_1142
Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase; Melittin resistance protein PqaB
0.29
0.22
10
Pf6N2E2
_493
YD repeat protein
no
0.22
11
Pf6N2E2
_778
Probable lipoprotein signal peptide
no
0.21
12
Pf6N2E2
_4176
hypothetical protein
no
0.21
13
Pf6N2E2
_867
PhaK-like protein
no
0.21
14
Pf6N2E2
_1780
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
no
0.20
15
Pf6N2E2
_5105
hypothetical protein
no
0.20
16
Pf6N2E2
_1365
FIG005548: transport protein
no
0.20
17
Pf6N2E2
_5466
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.20
18
Pf6N2E2
_770
Ribosylnicotinamide kinase (EC 2.7.1.22)
no
0.20
19
Pf6N2E2
_1985
Type IV secretory pathway, VirD4 components
no
0.20
20
Pf6N2E2
_3994
Ferrichrome-iron receptor
0.36
0.20
Or look for
negative cofitness