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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_452 from
Pseudomonas fluorescens FW300-N2E2
Rtn protein
SEED: Rtn protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_1301
TRAP-type C4-dicarboxylate transport system, periplasmic component
no
0.28
2
Pf6N2E2
_1688
Permeases of the major facilitator superfamily
no
0.27
3
Pf6N2E2
_3304
probable periplasmic protein NMA1059
no
0.25
4
Pf6N2E2
_1766
Outer membrane transporter, OMPP1/FadL/TodX family
no
0.22
5
Pf6N2E2
_3885
3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)
no
0.22
6
Pf6N2E2
_1364
Ferredoxin
no
0.22
7
Pf6N2E2
_1680
Ferrichrome-iron receptor
no
0.22
8
Pf6N2E2
_4604
FIG00955003: hypothetical protein
no
0.22
9
Pf6N2E2
_1861
Ferredoxin reductase
no
0.22
10
Pf6N2E2
_4333
Uncharacterized protein ImpD
0.31
0.21
11
Pf6N2E2
_1014
Nitrate/nitrite transporter
no
0.21
12
Pf6N2E2
_3886
ADP compounds hydrolase NudE (EC 3.6.1.-)
0.30
0.21
13
Pf6N2E2
_1093
Transcriptional regulatory protein
no
0.21
14
Pf6N2E2
_1467
NAD-dependent formate dehydrogenase alpha subunit
no
0.21
15
Pf6N2E2
_3388
putative integrase
no
0.20
16
Pf6N2E2
_5323
FIG00959654: hypothetical protein
no
0.20
17
Pf6N2E2
_854
Xylose isomerase domain protein TIM barrel
no
0.20
18
Pf6N2E2
_1060
Pirin
0.57
0.19
19
Pf6N2E2
_4557
oxidoreductase, 2OG-Fe(II) oxygenase family
0.16
0.19
20
Pf6N2E2
_1146
2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5)
(from data)
0.50
0.19
Or look for
negative cofitness