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Protein
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Top cofit genes for Pf6N2E2_4450 from
Pseudomonas fluorescens FW300-N2E2
Sterol desaturase
SEED: Sterol desaturase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_3560
membrane protein, putative
no
0.52
2
Pf6N2E2
_4451
FIG139438: lipoprotein B
0.66
0.49
3
Pf6N2E2
_1411
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
no
0.46
4
Pf6N2E2
_3807
Histidine utilization repressor
0.39
0.44
5
Pf6N2E2
_730
Respiratory nitrate reductase beta chain (EC 1.7.99.4)
0.59
0.42
6
Pf6N2E2
_5705
Sensor protein PhoQ (EC 2.7.13.3)
no
0.41
7
Pf6N2E2
_2180
Arginine N-succinyltransferase, alpha subunit (EC 2.3.1.109)
no
0.41
8
Pf6N2E2
_5239
Putative sulfate permease
0.61
0.41
9
Pf6N2E2
_729
Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
0.58
0.40
10
Pf6N2E2
_2201
Transmembrane regulator protein PrtR
0.60
0.40
11
Pf6N2E2
_2564
Positive regulator of CheA protein activity (CheW)
no
0.39
12
Pf6N2E2
_2340
Transcriptional regulator, GntR family
0.34
0.39
13
Pf6N2E2
_718
Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5)
no
0.39
14
Pf6N2E2
_4921
3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25)
0.55
0.39
15
Pf6N2E2
_722
FIG139928: Putative protease
0.46
0.38
16
Pf6N2E2
_732
Respiratory nitrate reductase gamma chain (EC 1.7.99.4)
no
0.38
17
Pf6N2E2
_4148
Glutamate-aspartate carrier protein
0.64
0.38
18
Pf6N2E2
_731
Respiratory nitrate reductase delta chain (EC 1.7.99.4)
no
0.37
19
Pf6N2E2
_736
hypothetical protein
no
0.37
20
Pf6N2E2
_735
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
0.67
0.37
Or look for
negative cofitness