Top cofit genes for Pf6N2E2_4394 from Pseudomonas fluorescens FW300-N2E2

Putrescine utilization regulator
SEED: Putrescine utilization regulator

Rank Hit Name Description Conserved? Cofitness  
1 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.52 0.56
2 Pf6N2E2_5560 Sigma-54 dependent transcriptional regulator/sensory box protein 0.45 0.45
3 Pf6N2E2_4813 Probable two-component sensor, near polyamine transporter 0.63 0.43
4 Pf6N2E2_4412 Ammonium transporter 0.29 0.41
5 Pf6N2E2_4476 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.55 0.40
6 Pf6N2E2_863 Transcriptional regulator, IclR family no 0.38
7 Pf6N2E2_2810 Cardiolipin synthetase (EC 2.7.8.-) 0.36 0.37
8 Pf6N2E2_5557 L-serine ammonia-lyase (EC 4.3.1.17) (from data) 0.28 0.37
9 Pf6N2E2_4014 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) 0.64 0.37
10 Pf6N2E2_5170 FIG00955330: hypothetical protein 0.66 0.36
11 Pf6N2E2_694 Outer membrane protein (porin) no 0.36
12 Pf6N2E2_5901 hypothetical protein no 0.36
13 Pf6N2E2_1606 Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) 0.26 0.35
14 Pf6N2E2_1391 DNA-binding response regulator, LuxR family no 0.35
15 Pf6N2E2_5534 FIG000859: hypothetical protein YebC 0.58 0.35
16 Pf6N2E2_4302 Uncharacterized protein ImpH/VasB no 0.34
17 Pf6N2E2_4121 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 0.34 0.33
18 Pf6N2E2_3072 [Protein-PII] uridylyltransferase (EC 2.7.7.59) 0.63 0.33
19 Pf6N2E2_3264 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters no 0.33
20 Pf6N2E2_2533 Rhodanese domain protein UPF0176 0.45 0.33

Or look for negative cofitness