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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_4364 from
Pseudomonas fluorescens FW300-N2E2
Protein YicC
SEED: Protein YicC
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_5723
GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)
0.84
0.30
2
Pf6N2E2
_5045
Permease of the drug/metabolite transporter (DMT) superfamily
no
0.28
3
Pf6N2E2
_5955
Aminodeoxychorismate lyase (EC 4.1.3.38)
0.84
0.28
4
Pf6N2E2
_1000
hypothetical protein
no
0.27
5
Pf6N2E2
_3381
Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE
0.34
0.27
6
Pf6N2E2
_3081
HesA/MoeB/ThiF family protein related to EC-YgdL
0.80
0.27
7
Pf6N2E2
_3079
Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA
0.76
0.26
8
Pf6N2E2
_2852
GGDEF domain/EAL domain protein
0.34
0.26
9
Pf6N2E2
_4636
periplasmic binding protein, putative
no
0.25
10
Pf6N2E2
_1383
YD repeat protein
no
0.25
11
Pf6N2E2
_3382
Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF
no
0.25
12
Pf6N2E2
_5150
Glucose-6-phosphate isomerase (EC 5.3.1.9)
0.70
0.25
13
Pf6N2E2
_3380
L-lactate permease
no
0.24
14
Pf6N2E2
_3383
Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF
no
0.24
15
Pf6N2E2
_882
FIG00961517: hypothetical protein
no
0.24
16
Pf6N2E2
_3384
Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG
no
0.23
17
Pf6N2E2
_1250
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent
no
0.23
18
Pf6N2E2
_4989
LrgA-associated membrane protein LrgB
no
0.23
19
Pf6N2E2
_3404
Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps
no
0.23
20
Pf6N2E2
_1625
Ferric reductase (1.6.99.14)
no
0.23
Or look for
negative cofitness