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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_43 from
Pseudomonas fluorescens FW300-N2E2
Histidine permease YuiF
SEED: Histidine permease YuiF
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_3574
Mannose-6-phosphate isomerase (EC 5.3.1.8)
0.42
0.49
2
Pf6N2E2
_2128
Short-chain dehydrogenase/reductase SDR
no
0.39
3
Pf6N2E2
_4886
Catalase (EC 1.11.1.6)
0.47
0.36
4
Pf6N2E2
_2129
Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup
0.26
0.36
5
Pf6N2E2
_5633
Aromatic amino acid transport protein AroP
0.27
0.33
6
Pf6N2E2
_3981
T1SS secreted agglutinin RTX
0.23
0.32
7
Pf6N2E2
_3351
tRNA pseudouridine synthase B (EC 4.2.1.70)
0.70
0.31
8
Pf6N2E2
_5678
hypothetical protein
no
0.31
9
Pf6N2E2
_3980
Type I secretion system, outer membrane component LapE
no
0.29
10
Pf6N2E2
_3979
Type I secretion system ATPase, LssB family LapB
0.22
0.29
11
Pf6N2E2
_1305
Homoprotocatechuate degradative operon repressor
no
0.28
12
Pf6N2E2
_3600
Fe-S OXIDOREDUCTASE (1.8.-.-)
0.57
0.28
13
Pf6N2E2
_2589
Flagellar protein FliJ
no
0.28
14
Pf6N2E2
_3978
Type I secretion system, membrane fusion protein LapC
no
0.28
15
Pf6N2E2
_1199
hypothetical protein
no
0.27
16
Pf6N2E2
_5368
Probable Co/Zn/Cd efflux system membrane fusion protein
no
0.27
17
Pf6N2E2
_4999
Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-)
0.68
0.27
18
Pf6N2E2
_5696
Flagellar basal-body rod modification protein FlgD
0.24
0.27
19
Pf6N2E2
_4386
Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
no
0.26
20
Pf6N2E2
_3962
Fibronectin type III domain protein
no
0.26
Or look for
negative cofitness