Top cofit genes for Pf6N2E2_4220 from Pseudomonas fluorescens FW300-N2E2

RNA polymerase sigma factor RpoE
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Rank Hit Name Description Conserved? Cofitness  
1 Pf6N2E2_2852 GGDEF domain/EAL domain protein no 0.25
2 Pf6N2E2_3725 FIG085779: Lipoprotein no 0.23
3 Pf6N2E2_4425 Adenylate cyclase (EC 4.6.1.1) no 0.23
4 Pf6N2E2_5006 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) no 0.23
5 Pf6N2E2_4750 Predicted signal-transduction protein containing cAMP-binding and CBS domains 0.59 0.21
6 Pf6N2E2_1085 Fe2+/Zn2+ uptake regulation proteins 0.64 0.21
7 Pf6N2E2_2198 Cytochrome B561, bacterial precursor no 0.21
8 Pf6N2E2_951 putative lipoprotein no 0.21
9 Pf6N2E2_962 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) no 0.21
10 Pf6N2E2_4935 Fic family protein no 0.21
11 Pf6N2E2_3408 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain no 0.21
12 Pf6N2E2_4449 Sigma cross-reacting protein 27A no 0.21
13 Pf6N2E2_3404 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps no 0.20
14 Pf6N2E2_837 HlyD family secretion protein no 0.20
15 Pf6N2E2_4768 Acyl-CoA dehydrogenase (EC 1.3.8.7) no 0.20
16 Pf6N2E2_4577 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) no 0.20
17 Pf6N2E2_380 putative ABC transporter, periplasmic substrate-binding protein no 0.20
18 Pf6N2E2_2514 regulator of length of O-antigen component of lipopolysaccharide chains no 0.19
19 Pf6N2E2_3898 FIG00961586: hypothetical protein no 0.19
20 Pf6N2E2_5458 Transposase and inactivated derivatives no 0.19

Or look for negative cofitness