Top cofit genes for Pf6N2E2_4194 from Pseudomonas fluorescens FW300-N2E2

Two-component response regulator
SEED: Two-component response regulator

Rank Hit Name Description Conserved? Cofitness  
1 Pf6N2E2_4031 Biofilm PGA outer membrane secretin PgaA 0.96 0.77
2 Pf6N2E2_4193 Signal transduction histidine kinase 0.96 0.72
3 Pf6N2E2_4030 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) 0.96 0.72
4 Pf6N2E2_4028 Biofilm PGA synthesis auxiliary protein PgaD 0.93 0.71
5 Pf6N2E2_4032 hypothetical protein no 0.67
6 Pf6N2E2_4029 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) 0.94 0.63
7 Pf6N2E2_3456 Inner membrane protein YfiN 0.43 0.62
8 Pf6N2E2_5491 FOG: GGDEF domain 0.70 0.62
9 Pf6N2E2_2587 Serine phosphatase RsbU, regulator of sigma subunit 0.46 0.51
10 Pf6N2E2_4926 hypothetical protein 0.51 0.48
11 Pf6N2E2_4341 IcmF-related protein 0.40 0.45
12 Pf6N2E2_4337 Uncharacterized protein ImpI/VasC 0.36 0.44
13 Pf6N2E2_2329 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) 0.69 0.44
14 Pf6N2E2_3978 Type I secretion system, membrane fusion protein LapC no 0.43
15 Pf6N2E2_3979 Type I secretion system ATPase, LssB family LapB no 0.43
16 Pf6N2E2_3457 Uncharacterized protein YfiR precursor no 0.41
17 Pf6N2E2_4011 Sensory box/GGDEF family protein no 0.41
18 Pf6N2E2_3980 Type I secretion system, outer membrane component LapE no 0.40
19 Pf6N2E2_3676 Phosphodiesterase/alkaline phosphatase D-like 0.33 0.39
20 Pf6N2E2_4001 Cytochrome c family protein 0.63 0.39

Or look for negative cofitness