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  • Top cofit genes for Pf6N2E2_4179 from Pseudomonas fluorescens FW300-N2E2

    Transcriptional regulator, TetR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_69 Probable type IV pilus assembly FimV-related transmembrane protein no 0.39
    2 Pf6N2E2_2622 Flagellar hook-associated protein FlgL no 0.38
    3 Pf6N2E2_4120 Trk system potassium uptake protein TrkA no 0.38
    4 Pf6N2E2_2570 Signal transduction histidine kinase CheA (EC 2.7.3.-) no 0.37
    5 Pf6N2E2_2565 CheW domain protein no 0.37
    6 Pf6N2E2_5129 ClpB protein 0.20 0.37
    7 Pf6N2E2_2710 FIG00953701: hypothetical protein no 0.37
    8 Pf6N2E2_2623 Flagellar hook-associated protein FlgK 0.33 0.37
    9 Pf6N2E2_2602 Flagellin protein FlaA no 0.37
    10 Pf6N2E2_2577 Flagellar biosynthesis protein FlhB 0.32 0.36
    11 Pf6N2E2_2627 Flagellar basal-body rod protein FlgG no 0.36
    12 Pf6N2E2_2566 Chromosome (plasmid) partitioning protein ParA no 0.36
    13 Pf6N2E2_2624 Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) no 0.36
    14 Pf6N2E2_3677 Sensory box/GGDEF family protein no 0.35
    15 Pf6N2E2_2564 Positive regulator of CheA protein activity (CheW) no 0.35
    16 Pf6N2E2_2575 Flagellar biosynthesis protein FlhF no 0.35
    17 Pf6N2E2_2580 Flagellar biosynthesis protein FliP no 0.35
    18 Pf6N2E2_5963 lipoprotein, putative no 0.35
    19 Pf6N2E2_2568 Flagellar motor rotation protein MotA 0.44 0.35
    20 Pf6N2E2_2569 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) no 0.35

    Or look for negative cofitness