Top cofit genes for Pf6N2E2_4152 from Pseudomonas fluorescens FW300-N2E2

alginate biosynthesis transcriptional regulatory protein AlgB
SEED: alginate biosynthesis transcriptional regulatory protein AlgB

Rank Hit Name Description Conserved? Cofitness  
1 Pf6N2E2_815 Signal transduction histidine kinase 0.45 0.70
2 Pf6N2E2_813 Response regulator 0.60 0.70
3 Pf6N2E2_818 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 0.56 0.66
4 Pf6N2E2_4150 probable exported protein YPO0432 0.52 0.66
5 Pf6N2E2_5255 Outer membrane stress sensor protease DegS 0.96 0.63
6 Pf6N2E2_2756 RNA polymerase sigma-H factor AlgT 0.95 0.63
7 Pf6N2E2_5278 Signal transduction histidine kinase 0.32 0.62
8 Pf6N2E2_3852 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) 0.46 0.59
9 Pf6N2E2_2217 ATP-dependent Clp protease ATP-binding subunit ClpX 0.94 0.57
10 Pf6N2E2_816 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 0.68 0.52
11 Pf6N2E2_3508 Probable two-component response regulator no 0.51
12 Pf6N2E2_3062 Membrane-associated zinc metalloprotease 0.87 0.50
13 Pf6N2E2_5720 BarA sensory histidine kinase (= VarS = GacS) 0.61 0.48
14 Pf6N2E2_2438 hypothetical protein no 0.47
15 Pf6N2E2_6044 Sensor histidine kinase/response regulator 0.73 0.46
16 Pf6N2E2_5874 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins 0.36 0.46
17 Pf6N2E2_2329 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.46
18 Pf6N2E2_2467 5'-nucleotidase (EC 3.1.3.5) no 0.46
19 Pf6N2E2_2022 BarA-associated response regulator UvrY (= GacA = SirA) 0.56 0.45
20 Pf6N2E2_3625 Flagellar motor rotation protein MotA no 0.44

Or look for negative cofitness