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  • Top cofit genes for Pf6N2E2_4128 from Pseudomonas fluorescens FW300-N2E2

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_5298 Sarcosine oxidase beta subunit (EC 1.5.3.1) no 0.19
    2 Pf6N2E2_2039 Sigma-54 dependent transcriptional regulator no 0.19
    3 Pf6N2E2_2295 Lipid A export ATP-binding/permease protein MsbA no 0.19
    4 Pf6N2E2_1972 FIG004780: hypothetical protein in PFGI-1-like cluster no 0.19
    5 Pf6N2E2_1135 COGs COG3558 no 0.19
    6 Pf6N2E2_4450 Sterol desaturase no 0.19
    7 Pf6N2E2_5731 Putative permease often clustered with de novo purine synthesis no 0.18
    8 Pf6N2E2_2211 Hydrolase, carbon-nitrogen family no 0.18
    9 Pf6N2E2_5956 FIG004453: protein YceG like no 0.18
    10 Pf6N2E2_1131 RNA polymerase sigma-70 factor, ECF subfamily no 0.17
    11 Pf6N2E2_1110 FIG00964414: hypothetical protein no 0.17
    12 Pf6N2E2_5577 Uncharacterized isomerase yddE, PhzC-PhzF family no 0.17
    13 Pf6N2E2_4570 Cation/multidrug efflux pump no 0.17
    14 Pf6N2E2_2479 Transcription elongation factor GreB no 0.17
    15 Pf6N2E2_404 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit no 0.16
    16 Pf6N2E2_838 Type I secretion outer membrane protein, TolC precursor no 0.16
    17 Pf6N2E2_149 Inner membrane component of tripartite multidrug resistance system no 0.16
    18 Pf6N2E2_2207 cytochrome b(561) no 0.16
    19 Pf6N2E2_931 hypothetical protein no 0.16
    20 Pf6N2E2_54 Transcriptional regulator, TetR family no 0.16

    Or look for negative cofitness