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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_4128 from
Pseudomonas fluorescens FW300-N2E2
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_5298
Sarcosine oxidase beta subunit (EC 1.5.3.1)
no
0.19
2
Pf6N2E2
_2039
Sigma-54 dependent transcriptional regulator
no
0.19
3
Pf6N2E2
_2295
Lipid A export ATP-binding/permease protein MsbA
no
0.19
4
Pf6N2E2
_1972
FIG004780: hypothetical protein in PFGI-1-like cluster
no
0.19
5
Pf6N2E2
_1135
COGs COG3558
no
0.19
6
Pf6N2E2
_4450
Sterol desaturase
no
0.19
7
Pf6N2E2
_5731
Putative permease often clustered with de novo purine synthesis
no
0.18
8
Pf6N2E2
_2211
Hydrolase, carbon-nitrogen family
no
0.18
9
Pf6N2E2
_5956
FIG004453: protein YceG like
no
0.18
10
Pf6N2E2
_1131
RNA polymerase sigma-70 factor, ECF subfamily
no
0.17
11
Pf6N2E2
_1110
FIG00964414: hypothetical protein
no
0.17
12
Pf6N2E2
_5577
Uncharacterized isomerase yddE, PhzC-PhzF family
no
0.17
13
Pf6N2E2
_4570
Cation/multidrug efflux pump
no
0.17
14
Pf6N2E2
_2479
Transcription elongation factor GreB
no
0.17
15
Pf6N2E2
_404
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
no
0.16
16
Pf6N2E2
_838
Type I secretion outer membrane protein, TolC precursor
no
0.16
17
Pf6N2E2
_149
Inner membrane component of tripartite multidrug resistance system
no
0.16
18
Pf6N2E2
_2207
cytochrome b(561)
no
0.16
19
Pf6N2E2
_931
hypothetical protein
no
0.16
20
Pf6N2E2
_54
Transcriptional regulator, TetR family
no
0.16
Or look for
negative cofitness