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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_4088 from
Pseudomonas fluorescens FW300-N2E2
Transcriptional regulator, AraC family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_5743
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
no
0.27
2
Pf6N2E2
_4416
Tyrosine recombinase XerC
0.21
0.26
3
Pf6N2E2
_89
hypothetical protein
no
0.26
4
Pf6N2E2
_5840
hypothetical protein
no
0.25
5
Pf6N2E2
_149
Inner membrane component of tripartite multidrug resistance system
0.23
0.25
6
Pf6N2E2
_5536
Holliday junction DNA helicase RuvA
no
0.25
7
Pf6N2E2
_5028
Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)
no
0.25
8
Pf6N2E2
_4741
hypothetical protein
no
0.25
9
Pf6N2E2
_4417
Protein of unknown function DUF484
no
0.23
10
Pf6N2E2
_147
Outer membrane component of tripartite multidrug resistance system
no
0.22
11
Pf6N2E2
_2586
Hpt domain protein
0.11
0.21
12
Pf6N2E2
_4127
Quinone oxidoreductase (EC 1.6.5.5)
no
0.21
13
Pf6N2E2
_3532
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
no
0.21
14
Pf6N2E2
_4387
FIG00957579: hypothetical protein
no
0.20
15
Pf6N2E2
_975
FIG141694: hypothetical protein in PFGI-1-like cluster
no
0.20
16
Pf6N2E2
_3713
Acyl carrier protein
no
0.20
17
Pf6N2E2
_5375
Oxidoreductase, short chain dehydrogenase/reductase family
0.12
0.20
18
Pf6N2E2
_3922
FIG00957011: hypothetical protein
no
0.20
19
Pf6N2E2
_5006
Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13)
no
0.20
20
Pf6N2E2
_2043
Twitching motility protein PilT
no
0.20
Or look for
negative cofitness