Top cofit genes for Pf6N2E2_4028 from Pseudomonas fluorescens FW300-N2E2

Biofilm PGA synthesis auxiliary protein PgaD
SEED: Biofilm PGA synthesis auxiliary protein PgaD
KEGG: biofilm PGA synthesis protein PgaD

Rank Hit Name Description Conserved? Cofitness  
1 Pf6N2E2_4031 Biofilm PGA outer membrane secretin PgaA 0.95 0.78
2 Pf6N2E2_4030 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) 0.94 0.71
3 Pf6N2E2_4194 Two-component response regulator 0.93 0.71
4 Pf6N2E2_4193 Signal transduction histidine kinase 0.93 0.69
5 Pf6N2E2_4032 hypothetical protein no 0.65
6 Pf6N2E2_4029 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) 0.92 0.58
7 Pf6N2E2_3456 Inner membrane protein YfiN 0.49 0.56
8 Pf6N2E2_5491 FOG: GGDEF domain 0.71 0.52
9 Pf6N2E2_4341 IcmF-related protein 0.53 0.51
10 Pf6N2E2_3979 Type I secretion system ATPase, LssB family LapB no 0.50
11 Pf6N2E2_3978 Type I secretion system, membrane fusion protein LapC no 0.50
12 Pf6N2E2_4337 Uncharacterized protein ImpI/VasC 0.34 0.48
13 Pf6N2E2_2587 Serine phosphatase RsbU, regulator of sigma subunit 0.45 0.48
14 Pf6N2E2_3980 Type I secretion system, outer membrane component LapE 0.35 0.46
15 Pf6N2E2_3981 T1SS secreted agglutinin RTX no 0.45
16 Pf6N2E2_4336 Uncharacterized protein ImpA no 0.44
17 Pf6N2E2_4328 Uncharacterized protein ImpH/VasB no 0.41
18 Pf6N2E2_4926 hypothetical protein 0.52 0.41
19 Pf6N2E2_3983 Membrane bound c-di-GMP receptor LapD 0.43 0.41
20 Pf6N2E2_2436 DNA-binding response regulator, LuxR family 0.29 0.40

Or look for negative cofitness