Top cofit genes for Pf6N2E2_3917 from Pseudomonas fluorescens FW300-N2E2

High-affinity choline uptake protein BetT
SEED: High-affinity choline uptake protein BetT
KEGG: high-affinity choline transport protein

Rank Hit Name Description Conserved? Cofitness  
1 Pf6N2E2_3331 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) / Osmotic adaptation 0.34 0.48
2 Pf6N2E2_3330 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) 0.23 0.46
3 Pf6N2E2_3333 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) 0.29 0.45
4 Pf6N2E2_3332 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) 0.23 0.44
5 Pf6N2E2_42 Sensor protein PhoQ (EC 2.7.13.3) no 0.41
6 Pf6N2E2_4677 Choline dehydrogenase (EC 1.1.99.1) 0.51 0.40
7 Pf6N2E2_5956 FIG004453: protein YceG like 0.32 0.35
8 Pf6N2E2_4432 Uroporphyrinogen-III synthase (EC 4.2.1.75) no 0.34
9 Pf6N2E2_3282 FIG005080: Possible exported protein no 0.33
10 Pf6N2E2_2278 Transcription-repair coupling factor 0.34 0.32
11 Pf6N2E2_5250 Restriction endonuclease no 0.31
12 Pf6N2E2_156 Carbon storage regulator no 0.31
13 Pf6N2E2_145 putative exported protein 0.22 0.30
14 Pf6N2E2_144 Uncharacterized protein YtfM precursor 0.25 0.30
15 Pf6N2E2_4433 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) 0.60 0.29
16 Pf6N2E2_3834 Lipoprotein NlpD no 0.29
17 Pf6N2E2_4584 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) 0.67 0.29
18 Pf6N2E2_4585 Cell division protein FtsX 0.32 0.28
19 Pf6N2E2_4754 Protein rarD no 0.27
20 Pf6N2E2_5132 NADH dehydrogenase (EC 1.6.99.3) 0.43 0.26

Or look for negative cofitness