Top cofit genes for Pf6N2E2_3739 from Pseudomonas fluorescens FW300-N2E2

General secretion pathway protein K

Rank Hit Name Description Conserved? Cofitness  
1 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) no 0.24
2 Pf6N2E2_463 Transcriptional regulatory protein RstA no 0.23
3 Pf6N2E2_2233 Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) 0.19 0.23
4 Pf6N2E2_5938 Isoquinoline 1-oxidoreductase alpha subunit (EC 1.3.99.16) no 0.20
5 Pf6N2E2_3637 yqiA-like hydrolase, affects the cell envelope (from data) no 0.20
6 Pf6N2E2_3855 Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1) no 0.20
7 Pf6N2E2_601 GlpG protein (membrane protein of glp regulon) no 0.19
8 Pf6N2E2_5790 ABC-type Fe3+ transport system, periplasmic component no 0.19
9 Pf6N2E2_2129 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup no 0.19
10 Pf6N2E2_2267 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) no 0.19
11 Pf6N2E2_4367 hypothetical protein no 0.19
12 Pf6N2E2_3567 FIG00963947: hypothetical protein no 0.19
13 Pf6N2E2_4886 Catalase (EC 1.11.1.6) 0.25 0.18
14 Pf6N2E2_5594 Endonuclease III (EC 4.2.99.18) 0.60 0.18
15 Pf6N2E2_1572 hypothetical protein no 0.18
16 Pf6N2E2_621 TPR domain protein in aerotolerance operon no 0.18
17 Pf6N2E2_4712 miscellaneous; unknown no 0.18
18 Pf6N2E2_5059 Transcriptional regulator, TetR family no 0.18
19 Pf6N2E2_2146 Porphobilinogen synthase (EC 4.2.1.24) no 0.18
20 Pf6N2E2_3575 Oxidoreductase, short chain dehydrogenase/reductase family no 0.18

Or look for negative cofitness