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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_3642 from
Pseudomonas fluorescens FW300-N2E2
lipoprotein, putative
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_2756
RNA polymerase sigma-H factor AlgT
0.33
0.37
2
Pf6N2E2
_4218
hypothetical protein
no
0.36
3
Pf6N2E2
_818
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY
no
0.35
4
Pf6N2E2
_2225
FIG00953489: hypothetical protein
0.73
0.35
5
Pf6N2E2
_2746
Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor
0.69
0.33
6
Pf6N2E2
_3062
Membrane-associated zinc metalloprotease
0.37
0.33
7
Pf6N2E2
_813
Response regulator
no
0.33
8
Pf6N2E2
_3504
Biosynthetic arginine decarboxylase (EC 4.1.1.19)
0.36
0.33
9
Pf6N2E2
_593
FIG00958166: hypothetical protein
no
0.31
10
Pf6N2E2
_2381
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
0.37
0.30
11
Pf6N2E2
_3833
hypothetical protein
no
0.30
12
Pf6N2E2
_2988
Putative NADPH-quinone reductase (modulator of drug activity B)
0.66
0.30
13
Pf6N2E2
_5780
Periplasmic protease
0.61
0.30
14
Pf6N2E2
_5171
Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
0.37
0.30
15
Pf6N2E2
_820
Sensory box sensor histidine kinase/response regulator (EC 2.7.3.-)
no
0.30
16
Pf6N2E2
_5278
Signal transduction histidine kinase
no
0.29
17
Pf6N2E2
_815
Signal transduction histidine kinase
no
0.29
18
Pf6N2E2
_2386
Magnesium and cobalt transport protein CorA
0.57
0.28
19
Pf6N2E2
_3111
Hydrolase of the alpha/beta superfamily in cluster with COG2110
no
0.28
20
Pf6N2E2
_5219
FIG140336: TPR domain protein
0.55
0.28
Or look for
negative cofitness