Top cofit genes for Pf6N2E2_3457 from Pseudomonas fluorescens FW300-N2E2

Uncharacterized protein YfiR precursor
SEED: Uncharacterized protein YfiR precursor

Rank Hit Name Description Conserved? Cofitness  
1 Pf6N2E2_3456 Inner membrane protein YfiN 0.49 0.48
2 Pf6N2E2_4193 Signal transduction histidine kinase no 0.47
3 Pf6N2E2_4030 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) no 0.46
4 Pf6N2E2_5491 FOG: GGDEF domain no 0.44
5 Pf6N2E2_4031 Biofilm PGA outer membrane secretin PgaA no 0.43
6 Pf6N2E2_4194 Two-component response regulator no 0.41
7 Pf6N2E2_4032 hypothetical protein no 0.40
8 Pf6N2E2_2436 DNA-binding response regulator, LuxR family no 0.39
9 Pf6N2E2_4028 Biofilm PGA synthesis auxiliary protein PgaD 0.18 0.38
10 Pf6N2E2_4029 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) 0.28 0.37
11 Pf6N2E2_4001 Cytochrome c family protein no 0.37
12 Pf6N2E2_3978 Type I secretion system, membrane fusion protein LapC no 0.36
13 Pf6N2E2_3981 T1SS secreted agglutinin RTX no 0.36
14 Pf6N2E2_4926 hypothetical protein 0.48 0.36
15 Pf6N2E2_2587 Serine phosphatase RsbU, regulator of sigma subunit 0.15 0.36
16 Pf6N2E2_3979 Type I secretion system ATPase, LssB family LapB 0.39 0.35
17 Pf6N2E2_2329 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.35
18 Pf6N2E2_3980 Type I secretion system, outer membrane component LapE no 0.33
19 Pf6N2E2_3983 Membrane bound c-di-GMP receptor LapD 0.65 0.33
20 Pf6N2E2_4341 IcmF-related protein no 0.27

Or look for negative cofitness