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  • Top cofit genes for Pf6N2E2_3445 from Pseudomonas fluorescens FW300-N2E2

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_2248 Aspartate racemase no 0.27
    2 Pf6N2E2_613 lipoprotein, putative no 0.23
    3 Pf6N2E2_1524 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative no 0.23
    4 Pf6N2E2_1384 SoxH protein, homolog no 0.22
    5 Pf6N2E2_3298 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) no 0.22
    6 Pf6N2E2_2637 Metal-dependent phosphohydrolase, HD subdomain no 0.22
    7 Pf6N2E2_4668 FIG00953367: hypothetical protein no 0.22
    8 Pf6N2E2_352 Opine oxidase subunit B no 0.22
    9 Pf6N2E2_5613 FIG00953674: hypothetical protein no 0.21
    10 Pf6N2E2_4276 Phosphogluconate repressor HexR, RpiR family no 0.21
    11 Pf6N2E2_1722 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) no 0.21
    12 Pf6N2E2_843 Phosphoglycolate phosphatase, archaeal type (EC 3.1.3.18) no 0.21
    13 Pf6N2E2_406 hypothetical protein no 0.20
    14 Pf6N2E2_658 sensor histidine kinase no 0.20
    15 Pf6N2E2_4638 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 0.18 0.20
    16 Pf6N2E2_687 4-oxalocrotonate tautomerase (EC 5.3.2.-) 0.19 0.20
    17 Pf6N2E2_5074 Catalase (EC 1.11.1.6) 0.38 0.20
    18 Pf6N2E2_605 FIG002465: BNR repeat protein no 0.20
    19 Pf6N2E2_833 Probable Co/Zn/Cd efflux system membrane fusion protein no 0.19
    20 Pf6N2E2_5775 FOG: TPR repeat, SEL1 subfamily no 0.19

    Or look for negative cofitness