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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_3415 from
Pseudomonas fluorescens FW300-N2E2
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_3172
Aliphatic amidase AmiE (EC 3.5.1.4)
no
0.25
2
Pf6N2E2
_3756
Type IV pilus biogenesis protein PilQ
no
0.24
3
Pf6N2E2
_4937
FIG00955149: hypothetical protein
no
0.24
4
Pf6N2E2
_437
Alkylated DNA repair protein AlkB
no
0.24
5
Pf6N2E2
_5517
Glutathione S-transferase (EC 2.5.1.18)
no
0.24
6
Pf6N2E2
_4336
Uncharacterized protein ImpA
no
0.23
7
Pf6N2E2
_4300
Uncharacterized protein similar to VCA0109
no
0.22
8
Pf6N2E2
_5434
hypothetical protein
no
0.22
9
Pf6N2E2
_1472
Cytochrome b561
no
0.22
10
Pf6N2E2
_472
FKBP-type peptidyl-prolyl cis-trans isomerase
no
0.22
11
Pf6N2E2
_190
Aliphatic amidase AmiE (EC 3.5.1.4)
no
0.22
12
Pf6N2E2
_2355
MxiG protein; Pathogenicity 1 island effector protein
no
0.21
13
Pf6N2E2
_3438
Glyoxalase family protein
no
0.21
14
Pf6N2E2
_4031
Biofilm PGA outer membrane secretin PgaA
no
0.21
15
Pf6N2E2
_3853
hypothetical protein
0.24
0.21
16
Pf6N2E2
_6088
hypothetical protein
no
0.21
17
Pf6N2E2
_1851
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
no
0.21
18
Pf6N2E2
_4015
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase (EC 6.3.2.13)
no
0.21
19
Pf6N2E2
_5753
Glutathione peroxidase family protein
no
0.20
20
Pf6N2E2
_1028
Transcriptional regulator, LysR family
no
0.20
Or look for
negative cofitness