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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_3413 from
Pseudomonas fluorescens FW300-N2E2
Fe2+-dicitrate sensor, membrane component
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_3141
virulence sensor protein
0.22
0.28
2
Pf6N2E2
_4403
FIG00963784: hypothetical protein
0.58
0.26
3
Pf6N2E2
_953
FIG00958851: hypothetical protein
no
0.26
4
Pf6N2E2
_2788
Transcriptional regulator, AsnC family
no
0.25
5
Pf6N2E2
_5092
FIG00953225: hypothetical protein
no
0.25
6
Pf6N2E2
_4697
hypothetical protein
no
0.25
7
Pf6N2E2
_2856
Ketosteroid isomerase homolog
no
0.25
8
Pf6N2E2
_1639
ABC-type phosphate transport system, periplasmic component
no
0.24
9
Pf6N2E2
_3748
Cytochrome B561
no
0.24
10
Pf6N2E2
_1813
ABC-type oligopeptide transport system, ATPase component
no
0.24
11
Pf6N2E2
_4332
hypothetical protein
no
0.24
12
Pf6N2E2
_1997
FIG00956406: hypothetical protein
no
0.24
13
Pf6N2E2
_3810
Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1)
no
0.24
14
Pf6N2E2
_4252
Membrane protease subunits, stomatin/prohibitin homologs
no
0.24
15
Pf6N2E2
_3403
Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7)
no
0.24
16
Pf6N2E2
_5310
Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-)
0.14
0.23
17
Pf6N2E2
_1725
Sensory box histidine kinase
no
0.23
18
Pf6N2E2
_2796
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.23
19
Pf6N2E2
_2140
Paraquat-inducible protein A
no
0.23
20
Pf6N2E2
_112
hypothetical protein
no
0.22
Or look for
negative cofitness