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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_341 from
Pseudomonas fluorescens FW300-N2E2
sensor histidine kinase
SEED: sensor histidine kinase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_1510
FIG00450095: hypothetical protein
no
0.28
2
Pf6N2E2
_139
Two-component response regulator
no
0.22
3
Pf6N2E2
_5381
Alginate lyase precursor (EC 4.2.2.3)
no
0.22
4
Pf6N2E2
_781
Outer membrane autotransporter barrel
no
0.22
5
Pf6N2E2
_1135
COGs COG3558
no
0.22
6
Pf6N2E2
_801
Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-)
no
0.21
7
Pf6N2E2
_36
Possible oxidoreductase
no
0.21
8
Pf6N2E2
_5888
Putative NADP-dependent oxidoreductase PA1648
no
0.21
9
Pf6N2E2
_2095
Permeases of the major facilitator superfamily
no
0.20
10
Pf6N2E2
_1228
Lipase (EC 3.1.1.3)
no
0.20
11
Pf6N2E2
_3400
hypothetical protein
no
0.19
12
Pf6N2E2
_18
Outer membrane pyoverdine eflux protein
no
0.19
13
Pf6N2E2
_1873
Amidase
no
0.19
14
Pf6N2E2
_1602
hypothetical protein
no
0.19
15
Pf6N2E2
_2231
FIG00956224: hypothetical protein
no
0.19
16
Pf6N2E2
_4531
hypothetical protein
no
0.19
17
Pf6N2E2
_375
Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system
no
0.18
18
Pf6N2E2
_1687
putative iron ABC transporter ATP-binding protein
no
0.18
19
Pf6N2E2
_1862
Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10)
no
0.18
20
Pf6N2E2
_3827
FIG00955429: hypothetical protein
no
0.18
Or look for
negative cofitness