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  • Top cofit genes for Pf6N2E2_341 from Pseudomonas fluorescens FW300-N2E2

    sensor histidine kinase
    SEED: sensor histidine kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_1510 FIG00450095: hypothetical protein no 0.28
    2 Pf6N2E2_139 Two-component response regulator no 0.22
    3 Pf6N2E2_5381 Alginate lyase precursor (EC 4.2.2.3) no 0.22
    4 Pf6N2E2_781 Outer membrane autotransporter barrel no 0.22
    5 Pf6N2E2_1135 COGs COG3558 no 0.22
    6 Pf6N2E2_801 Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-) no 0.21
    7 Pf6N2E2_36 Possible oxidoreductase no 0.21
    8 Pf6N2E2_5888 Putative NADP-dependent oxidoreductase PA1648 no 0.21
    9 Pf6N2E2_2095 Permeases of the major facilitator superfamily no 0.20
    10 Pf6N2E2_1228 Lipase (EC 3.1.1.3) no 0.20
    11 Pf6N2E2_3400 hypothetical protein no 0.19
    12 Pf6N2E2_18 Outer membrane pyoverdine eflux protein no 0.19
    13 Pf6N2E2_1873 Amidase no 0.19
    14 Pf6N2E2_1602 hypothetical protein no 0.19
    15 Pf6N2E2_2231 FIG00956224: hypothetical protein no 0.19
    16 Pf6N2E2_4531 hypothetical protein no 0.19
    17 Pf6N2E2_375 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system no 0.18
    18 Pf6N2E2_1687 putative iron ABC transporter ATP-binding protein no 0.18
    19 Pf6N2E2_1862 Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10) no 0.18
    20 Pf6N2E2_3827 FIG00955429: hypothetical protein no 0.18

    Or look for negative cofitness