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  • Top cofit genes for Pf6N2E2_3398 from Pseudomonas fluorescens FW300-N2E2

    Small GTP-binding protein domain
    SEED: Small GTP-binding protein domain

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_3395 hypothetical protein no 0.33
    2 Pf6N2E2_3399 hypothetical protein no 0.29
    3 Pf6N2E2_3854 putative exported protein no 0.29
    4 Pf6N2E2_2005 Glycoprotein gp2 no 0.28
    5 Pf6N2E2_1862 Benzoate 1,2-dioxygenase beta subunit (EC 1.14.12.10) no 0.27
    6 Pf6N2E2_3403 Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7) no 0.26
    7 Pf6N2E2_2000 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes no 0.25
    8 Pf6N2E2_2665 FIG00959721: hypothetical protein no 0.25
    9 Pf6N2E2_2196 FIG00953347: hypothetical protein no 0.24
    10 Pf6N2E2_5202 Methyl-accepting chemotaxis protein no 0.24
    11 Pf6N2E2_1671 Transcriptional regulator, TetR family no 0.23
    12 Pf6N2E2_2006 Rhs family protein no 0.23
    13 Pf6N2E2_2246 Arabinose efflux permease no 0.23
    14 Pf6N2E2_3200 Putative membrane protein no 0.23
    15 Pf6N2E2_1885 Transcriptional regulator, AraC family no 0.22
    16 Pf6N2E2_2220 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) no 0.21
    17 Pf6N2E2_4487 YD repeat protein no 0.21
    18 Pf6N2E2_3392 Thermostable 8-oxoguanine DNA glycosylase no 0.21
    19 Pf6N2E2_2170 Cysteine desulfurase (EC 2.8.1.7) no 0.21
    20 Pf6N2E2_1011 hypothetical protein no 0.21

    Or look for negative cofitness