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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_334 from
Pseudomonas fluorescens FW300-N2E2
Transcriptional regulator
SEED: Transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_2186
Isovaleryl-CoA dehydrogenase (EC 1.3.8.4)
no
0.29
2
Pf6N2E2
_3248
Probable transmembrane protein
no
0.28
3
Pf6N2E2
_5175
Acetolactate synthase large subunit (EC 2.2.1.6)
no
0.26
4
Pf6N2E2
_4759
Biotin synthase (EC 2.8.1.6)
0.82
0.25
5
Pf6N2E2
_50
Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57)
no
0.24
6
Pf6N2E2
_1190
Glutamine-dependent 2-keto-4-methylthiobutyrate transaminase
no
0.24
7
Pf6N2E2
_656
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.24
8
Pf6N2E2
_2226
Integral membrane protein TerC
no
0.24
9
Pf6N2E2
_658
sensor histidine kinase
0.22
0.24
10
Pf6N2E2
_1187
Probable nikkomycin biosynthesis protein, carboxylase
no
0.24
11
Pf6N2E2
_2588
Anti-sigma F factor antagonist (spoIIAA-2); Anti-sigma B factor antagonist RsbV
0.28
0.24
12
Pf6N2E2
_3349
Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)
0.20
0.24
13
Pf6N2E2
_71
Phosphoribosylanthranilate isomerase (EC 5.3.1.24)
no
0.23
14
Pf6N2E2
_4009
GGDEF domain protein
no
0.23
15
Pf6N2E2
_5177
Ketol-acid reductoisomerase (EC 1.1.1.86)
no
0.23
16
Pf6N2E2
_2144
Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1)
no
0.23
17
Pf6N2E2
_4826
Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
no
0.23
18
Pf6N2E2
_2529
Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
no
0.22
19
Pf6N2E2
_66
3-isopropylmalate dehydrogenase (EC 1.1.1.85)
no
0.22
20
Pf6N2E2
_2073
Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)
no
0.22
Or look for
negative cofitness