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  • Top cofit genes for Pf6N2E2_3222 from Pseudomonas fluorescens FW300-N2E2

    Hydroxypyruvate isomerase (EC 5.3.1.22)
    SEED: Hydroxypyruvate isomerase (EC 5.3.1.22)

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_5480 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) no 0.23
    2 Pf6N2E2_2979 Histone acetyltransferase HPA2 and related acetyltransferases no 0.22
    3 Pf6N2E2_4248 SAM-dependent methyltransferases no 0.22
    4 Pf6N2E2_2206 VgrG protein no 0.22
    5 Pf6N2E2_4684 hypothetical protein no 0.22
    6 Pf6N2E2_5660 L-Arginine ABC transporter, periplasmic substrate-binding component (from data) no 0.21
    7 Pf6N2E2_3121 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 0.58 0.21
    8 Pf6N2E2_1500 LysR family transcriptional regulator lrhA no 0.21
    9 Pf6N2E2_4162 DNA polymerase I (EC 2.7.7.7) no 0.20
    10 Pf6N2E2_628 2-ketogluconate transporter no 0.20
    11 Pf6N2E2_4893 hypothetical protein no 0.19
    12 Pf6N2E2_778 Probable lipoprotein signal peptide no 0.19
    13 Pf6N2E2_703 Cytochrome c55X precursor NirC no 0.19
    14 Pf6N2E2_322 Transcriptional regulator, LacI family no 0.19
    15 Pf6N2E2_2963 FIG003033: Helicase domain protein no 0.19
    16 Pf6N2E2_86 FIG022160: hypothetical toxin no 0.19
    17 Pf6N2E2_407 Phosphohydrolase (MutT/nudix family protein) no 0.19
    18 Pf6N2E2_6067 ABC transporter in pyoverdin gene cluster, ATP-binding component no 0.19
    19 Pf6N2E2_3931 ATPases of the AAA+ class no 0.19
    20 Pf6N2E2_2729 membrane protein, putative no 0.18

    Or look for negative cofitness