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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_3208 from
Pseudomonas fluorescens FW300-N2E2
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_3613
GTP-binding protein HflX
no
0.28
2
Pf6N2E2
_1457
Xylose ABC transporter, permease protein XylH
no
0.27
3
Pf6N2E2
_1578
T1SS secreted agglutinin RTX
no
0.23
4
Pf6N2E2
_2225
FIG00953489: hypothetical protein
no
0.22
5
Pf6N2E2
_2863
Gluconate permease
no
0.22
6
Pf6N2E2
_4562
L-cystine uptake protein TcyP
no
0.21
7
Pf6N2E2
_4124
Uncharacterized protein with LysM domain, COG1652
no
0.20
8
Pf6N2E2
_968
FIG00962395: hypothetical protein
no
0.20
9
Pf6N2E2
_3212
Signal transduction histidine kinase
no
0.20
10
Pf6N2E2
_2502
O-antigen acetylase
no
0.19
11
Pf6N2E2
_5571
hypothetical protein
no
0.19
12
Pf6N2E2
_1978
DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster
no
0.19
13
Pf6N2E2
_2756
RNA polymerase sigma-H factor AlgT
no
0.19
14
Pf6N2E2
_3851
bacteriophytochrome heme oxygenase BphO
no
0.18
15
Pf6N2E2
_5316
Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation
no
0.18
16
Pf6N2E2
_816
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80)
no
0.18
17
Pf6N2E2
_4362
DNA-directed RNA polymerase omega subunit (EC 2.7.7.6)
no
0.18
18
Pf6N2E2
_2051
ABC transporter for D-Glucosamine Hydrochloride, permease component 1
(from data)
no
0.18
19
Pf6N2E2
_2546
Carbon storage regulator
no
0.18
20
Pf6N2E2
_5442
Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2)
no
0.17
Or look for
negative cofitness