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  • Top cofit genes for Pf6N2E2_3208 from Pseudomonas fluorescens FW300-N2E2

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_3613 GTP-binding protein HflX no 0.28
    2 Pf6N2E2_1457 Xylose ABC transporter, permease protein XylH no 0.27
    3 Pf6N2E2_1578 T1SS secreted agglutinin RTX no 0.23
    4 Pf6N2E2_2225 FIG00953489: hypothetical protein no 0.22
    5 Pf6N2E2_2863 Gluconate permease no 0.22
    6 Pf6N2E2_4562 L-cystine uptake protein TcyP no 0.21
    7 Pf6N2E2_4124 Uncharacterized protein with LysM domain, COG1652 no 0.20
    8 Pf6N2E2_968 FIG00962395: hypothetical protein no 0.20
    9 Pf6N2E2_3212 Signal transduction histidine kinase no 0.20
    10 Pf6N2E2_2502 O-antigen acetylase no 0.19
    11 Pf6N2E2_5571 hypothetical protein no 0.19
    12 Pf6N2E2_1978 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster no 0.19
    13 Pf6N2E2_2756 RNA polymerase sigma-H factor AlgT no 0.19
    14 Pf6N2E2_3851 bacteriophytochrome heme oxygenase BphO no 0.18
    15 Pf6N2E2_5316 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation no 0.18
    16 Pf6N2E2_816 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) no 0.18
    17 Pf6N2E2_4362 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) 0.55 0.18
    18 Pf6N2E2_2051 ABC transporter for D-Glucosamine Hydrochloride, permease component 1 (from data) no 0.18
    19 Pf6N2E2_2546 Carbon storage regulator no 0.18
    20 Pf6N2E2_5442 Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2) no 0.17

    Or look for negative cofitness