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  • Top cofit genes for Pf6N2E2_3207 from Pseudomonas fluorescens FW300-N2E2

    Colicin E3 (EC 3.1.-.-)
    SEED: Colicin E3 (EC 3.1.-.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_3886 ADP compounds hydrolase NudE (EC 3.6.1.-) no 0.27
    2 Pf6N2E2_5059 Transcriptional regulator, TetR family no 0.26
    3 Pf6N2E2_551 Protein ImpG/VasA no 0.23
    4 Pf6N2E2_4434 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation 0.49 0.22
    5 Pf6N2E2_3321 Ornithine cyclodeaminase (EC 4.3.1.12) no 0.22
    6 Pf6N2E2_2852 GGDEF domain/EAL domain protein no 0.21
    7 Pf6N2E2_4308 Uncharacterized protein ImpJ/VasE no 0.21
    8 Pf6N2E2_1832 COGs COG3777 no 0.21
    9 Pf6N2E2_5346 rRNA small subunit methyltransferase I no 0.20
    10 Pf6N2E2_205 hypothetical protein no 0.20
    11 Pf6N2E2_1286 Hemolysin activation/secretion protein associated with VreARI signalling system no 0.19
    12 Pf6N2E2_3858 Amino acid ABC transporter, permease protein no 0.18
    13 Pf6N2E2_4399 GGDEF domain/EAL domain protein no 0.18
    14 Pf6N2E2_4115 Probable signal peptide protein no 0.18
    15 Pf6N2E2_5057 hypothetical protein no 0.18
    16 Pf6N2E2_2335 Transcriptional regulator, GntR family no 0.18
    17 Pf6N2E2_3322 Peptide synthetase no 0.18
    18 Pf6N2E2_5862 Lipoprotein, putative no 0.18
    19 Pf6N2E2_4674 Permeases of the major facilitator superfamily no 0.18
    20 Pf6N2E2_4154 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.18

    Or look for negative cofitness