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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_3207 from
Pseudomonas fluorescens FW300-N2E2
Colicin E3 (EC 3.1.-.-)
SEED: Colicin E3 (EC 3.1.-.-)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_3886
ADP compounds hydrolase NudE (EC 3.6.1.-)
no
0.27
2
Pf6N2E2
_5059
Transcriptional regulator, TetR family
no
0.26
3
Pf6N2E2
_551
Protein ImpG/VasA
no
0.23
4
Pf6N2E2
_4434
Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation
no
0.22
5
Pf6N2E2
_3321
Ornithine cyclodeaminase (EC 4.3.1.12)
no
0.22
6
Pf6N2E2
_2852
GGDEF domain/EAL domain protein
no
0.21
7
Pf6N2E2
_4308
Uncharacterized protein ImpJ/VasE
no
0.21
8
Pf6N2E2
_1832
COGs COG3777
no
0.21
9
Pf6N2E2
_5346
rRNA small subunit methyltransferase I
no
0.20
10
Pf6N2E2
_205
hypothetical protein
no
0.20
11
Pf6N2E2
_1286
Hemolysin activation/secretion protein associated with VreARI signalling system
no
0.19
12
Pf6N2E2
_3858
Amino acid ABC transporter, permease protein
no
0.18
13
Pf6N2E2
_4399
GGDEF domain/EAL domain protein
no
0.18
14
Pf6N2E2
_4115
Probable signal peptide protein
no
0.18
15
Pf6N2E2
_5057
hypothetical protein
no
0.18
16
Pf6N2E2
_2335
Transcriptional regulator, GntR family
no
0.18
17
Pf6N2E2
_3322
Peptide synthetase
no
0.18
18
Pf6N2E2
_5862
Lipoprotein, putative
no
0.18
19
Pf6N2E2
_4674
Permeases of the major facilitator superfamily
no
0.18
20
Pf6N2E2
_4154
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.18
Or look for
negative cofitness